Transcription Factor

Accessions: 1if1_B (3D-footprint 20231221)
Names: INTERFERON REGULATORY FACTOR 1, IRF-1, IRF1_MOUSE
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P15314
Length: 104
Pfam Domains: 1-104 Interferon regulatory factor transcription factor
Sequence:
(in bold interface residues)
1 MRPWLEMQINSNQIPGLIWINKEEMIFQIPWKHAAKHGWDINKDACLFRSWAIHTGRYKA 60
61 GEKEPDPKTWKANFRCAMNSLPDIEEVKDQSRNKGSSAVRVYRM
Interface Residues: 33, 35, 44, 68, 72, 73, 75, 76, 79, 80, 83
3D-footprint Homologues: 2pi0_B, 1if1_B, 2o61_A, 5xh6_A, 2irf_L, 7oot_B
Binding Motifs: 1if1_AB TGGAnnTACtTACA
1if1_B TGrAwG
Binding Sites: 1if1_D
Publications: ESCALANTE C.R., YIE J., THANOS D., AGGARWAL A.K. Structure of IRF-1 with bound DNA reveals determinants of interferon regulation.. Nature 391:103-106 (1998). [Pubmed]
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.