Transcription Factor
| Accessions: | 5edn_G (3D-footprint 20231221) |
| Names: | Homeobox protein Hox-B13, HXB13_HUMAN |
| Organisms: | Homo sapiens |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | Q92826 |
| Length: | 60 |
| Pfam Domains: | 1-56 Homeobox domain |
| Sequence: (in bold interface residues) | 1 KKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITIWFQNRRVKEKKVLAK 60 |
| Interface Residues: | 1, 2, 3, 11, 27, 29, 41, 42, 44, 45, 48, 49, 52, 53, 56 |
| 3D-footprint Homologues: | 1nk2_P, 1zq3_P, 2lkx_A, 7q3o_C, 6es3_K, 2ld5_A, 3cmy_A, 2hdd_A, 7psx_B, 6a8r_A, 2r5y_A, 6m3d_C, 1au7_A, 5jlw_D, 3lnq_A, 2hos_A, 1fjl_B, 4xrs_G, 1b72_A, 5zfz_A, 3rkq_B, 1ig7_A, 5flv_I, 3a01_E, 2h1k_B, 5zjt_E, 4cyc_A, 1puf_A, 1jgg_B, 6vu3_A, 6vz3_A, 1e3o_C, 2xsd_C, 1le8_A, 7xrc_C, 5hod_A, 1mnm_C, 4qtr_D, 1puf_B, 1k61_B, 1o4x_A, 6fqp_B, 1le8_B, 1du0_A, 6fqq_E |
| Binding Motifs: | 5edn_BG gnnnnnGTAAAnnnnnGnnnnnntnaCTAG |
| Binding Sites: | 5edn_D 5edn_E |
| Publications: | Morgunova E, Yin Y, Das PK, Jolma A, Zhu F, Popov A, Xu Y, Nilsson L, Taipale J. Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima. Elife : (2018). [Pubmed] |
| Related annotations: | PaperBLAST |
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