Transcription Factor
Accessions: | T117763_1.02 (CISBP 1.02) |
Names: | mybE, T117763_1.02; |
Organisms: | Dictyostelium discoideum |
Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
Notes: | experiment type:PBM, family:Myb/SANT |
Length: | 818 |
Pfam Domains: | 645-682 Myb-like DNA-binding domain 645-682 Myb-like DNA-binding domain |
Sequence: (in bold interface residues) | 1 MESKVGYKPMVDFNNNNNNNNNNNNNNMKPEDANAAIDNSNANANSNVNGYYSSPSSNYS 60 61 HSPRSPTSSTVVAQSANEDHQQPQPPQQQQPPQQHQSSQPMQESKPIQTHIQHLTANSTS 120 121 PQQQQQQQQQPQQQQQQQQQQQQQQQQQQQQQQHHQQSHNNNFNNNNNNNNNSNNNNNNN 180 181 QPLSPQKIEIIRSDTTQNSHYTKSSSPPTQVTSPSISSATTPTNMSPPHSDLNNNQNNNQ 240 241 NNNNNNNINVKSSRDEGSSSSSKRRESENGSRGGESGSTSSRDRERDRDRERERERERDR 300 301 ERERERGRDRSDRNDRGDRNDHNNNNNNNNNNNINNNDDRYNNSNNNNSNNNFNNNNNNN 360 361 NINNNNNNNNSGSGNSGGSVSNNDRDRSINDRRSDGRRNVGGNGSPAGSSPSLQSMNSII 420 421 SSNKKDNNNNNNNNNNINNINNSNSNNNYNNSNNNNNSNSQQPQQQQQQQQQQQQQQQFQ 480 481 QQQQYIRELQQSLDSQTKNNQVLSDKIRDLDDTLNKKTVLLSKYRKALLKFFEDREVEGE 540 541 TGFDNSSERSLSRSPSRERSRSHSRSRSRSRSRSHSRSISRSRSSSPMNYGNNGNNNNGY 600 601 QSSNNSNKSSSYNSPEKGELKRKSGGDDGKDVKRRKTGSRRNTLWTTEDDEKFAEAYNKY 660 661 GKSWKTIHSHLPDKTREQVQSHGQYLIRIGKLQDLHKDGRRTRHIKPDLGLGNNNNNSNS 720 721 NSNNNNNNNNNNSGGGNNHHHSSHHNHHSPSHHNDNKHHHHHNNNNNNNNNNNNHNNNLN 780 781 ILNNLTNNNHNNNNNYDYDSPQSQLDSPRDDIDDEILI |
Interface Residues: | 676, 677, 680, 681, 684, 685, 686 |
3D-footprint Homologues: | 1mse_C, 3osg_A |
Binding Motifs: | M1349_1.02 wwsakrtAaw |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.