Transcription Factor

Accessions: Q24217 (JASPAR 2024)
Names: PAR domain protein 1-delta, PAR-domain protein 1, isoform I, Q24217_DROME
Organisms: Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q24217
Length: 232
Pfam Domains: 165-218 Basic region leucine zipper
166-223 bZIP transcription factor
Sequence:
(in bold interface residues)
1 MSDRERSSPTLIETGLKNLIGGRDGNYPLISGINGKSTSNSKEIICPDDKYKEEGDIWNV 60
61 EAQTAFLGPNLWDKTLPYDADLKVTQYADLDEFLSENNIPDGLPGTHLGHSSGLGHRSDS 120
121 LGHAAGLSLGLGHITTKRERSPSPSDCISPDTLNPPSPAESNELKDDKYWARRRKNNIAA 180
181 KRSRDARRQKENQIAMRARYLEKENATLHQEVEQLKQENMDLRARLSKFQDV
Interface Residues: 173, 176, 177, 179, 180, 183, 184
3D-footprint Homologues: 6mg1_B, 1nwq_C, 5t01_B
Binding Motifs: MA1702.1 wrTTATGYAAyw
MA1702.2 TTATGYAA
Binding Sites: MA1702.2.11
MA1702.2.14 / MA1702.2.15 / MA1702.2.8 / MA1702.2.9
MA1702.2.1 / MA1702.2.19 / MA1702.2.2 / MA1702.2.3
MA1702.2.13 / MA1702.2.18 / MA1702.2.4
MA1702.1.1
MA1702.1.10
MA1702.1.11
MA1702.1.12
MA1702.1.13
MA1702.1.14
MA1702.1.15
MA1702.1.16
MA1702.1.17
MA1702.1.18
MA1702.1.19
MA1702.1.2
MA1702.1.20
MA1702.1.3
MA1702.1.4
MA1702.1.5
MA1702.1.6
MA1702.1.7
MA1702.1.8
MA1702.1.9
MA1702.2.10
MA1702.2.12 / MA1702.2.5
MA1702.2.16
MA1702.2.17 / MA1702.2.7
MA1702.2.20
MA1702.2.6
Publications: Nitta KR, Jolma A, Yin Y, Morgunova E, Kivioja T, Akhtar J, Hens K, Toivonen J, Deplancke B, Furlong EE, Taipale J. Conservation of transcription factor binding specificities across 600 million years of bilateria evolution. Elife : (2015). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.