Transcription Factor
Accessions: | GATA3_DBD (HumanTF 1.0) |
Names: | GATA-binding factor 3, GATA3, GATA3_HUMAN, Trans-acting T-cell-specific transcription factor GATA-3 |
Organisms: | Homo sapiens |
Libraries: | HumanTF 1.0 1 1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] |
Uniprot: | P23771 |
Notes: | Ensembl ID: ENSG00000107485; DNA-binding domain sequence; TF family: GATA; Clone source: Megaman |
Length: | 146 |
Pfam Domains: | 28-61 GATA zinc finger 82-114 GATA zinc finger |
Sequence: (in bold interface residues) | 1 MASLLGGSPTGFGCKSRPKARSSTGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNG 60 61 QNRPLIKPKRRLSAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLT 120 121 MKKEGIQTRNRKMSSKSKKCKKVHDS |
Interface Residues: | 37, 38, 40, 50, 54, 91, 92, 94, 104, 108, 109, 112, 128, 129, 131, 132 |
3D-footprint Homologues: | 4hc9_A, 3vd6_C, 1gat_A, 3dfx_B, 4gat_A, 6cnb_R |
Binding Motifs: | GATA3_DBD aGATAasr |
Publications: | Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.