Transcription Factor
| Accessions: | XP_013635977.1 (EEADannot 2026-03-04) |
| Names: | SPL1 |
| Organisms: | Brassica oleracea var. oleracea |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:C3H(C),C2HC zinc-fingers like factors SBP |
| Length: | 889 |
| Pfam Domains: | 131-208 SBP domain |
| Sequence: (in bold interface residues) | 1 MEARIEGEGQHFYGYRAMDVGKRSVEWDLNDWKWDGDLFIATPLNPGVSQTMGRQFFPLG 60 61 NSSNTSSSCSDEGNDNTREVEKRRRAAATGEDGGGGGLSLKLGENGYDLNGEREGKKTKL 120 121 GGGSGTNHRSVCQVESCEADLSKVKDYHRRHKVCEMHSKATSALVGGIMQRFCQQCSRFH 180 181 VLEEFDEGKRSCRRRLAGHNKRRRKTNPEPAANGNPLSDDNQSSNYLLICLLKILSNMHS 240 241 ANGSSGDQDLMPHLLKSLVSHAGEQLGKNLVELLLQGGSGLLAAPQEDSKQAPELPRQEL 300 301 YASGNRSEKLQTKVNDFDLNDIYIDSDDGGTDLERSSPPTTTTNPATSSPDYPSWIHQTS 360 361 RNSDSASDQSPSSSSEDAQMRTGRIVFKLFGKEPNDFPPVLRGQILDWLSHTPTDIESYI 420 421 RPGCIVLTIYLRQAETAWEELSDDMGFSLSKLLDLSDDPLWTSGWIYVRMQNQYAFVFDG 480 481 QVVVDSSLPLRSHDYSHIISVRPLAVAAATGKAQFTVKGINLRRPGTRLLCAVEGKYLIQ 540 541 ENDDLKESNECVSFSCDLPITSGRGFMEIEDQGGLSSSFFPFIVVEEDDVCSEIRILETT 600 601 LEFTDTDSAKLAMEFIHELGWLLRRSKLGVFSLARFKWLIEFSMDREWCAVIRKLLNMLF 660 661 EGAVGDTSSDAAALSELCLLHRAVRKNSKPMVEMLLRYVVPNQQRIHSLFRPDSAGPAGL 720 721 TPLHIAAGKDGSEDVLDALTEDPSMVGIEAWRTSRDTTGFTPEDYARLRGHFSYIHLIQR 780 781 KINKKSATEDHVVVNIPASSISDREQKETKSGSSALEITHGNHKLQCKLCDHKLVYGTAR 840 841 RSVAYRPAMLSMVAIAAVCVCVALLFKSCPEVLYVFQPFRWELLDYGTR |
| Interface Residues: | 119, 123, 764, 765, 767, 768 |
| 3D-footprint Homologues: | 8d0b_F, 8d0k_F, 8g9l_A, 8ifk_B, 8ffi_L |
| Binding Motifs: | EEAD0680 tGTACGGA |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.