Transcription Factor

						

			
Accessions: T24840 (AthalianaCistrome v4_May2016)

			
Names: AT5G14340, MYB40, T24840;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: ecotype:Col-0, experiment type: DAP-seq, family:MYB
Length: 263
Pfam Domains:     14-61 Myb-like DNA-binding domain
    17-77 Myb-like DNA-binding domain
   67-110 Myb-like DNA-binding domain
   70-119 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MGRKPCCDKIGLKRGPWTIEEDHRLMNFILNNGIHCWRIVPKLAGLLRCGKSCRLRWINY   60
  61 LRPDLKRGGFTDAEEDRIMELHSQLGNRWSKIASHFSGRTDNEIKNHWNTKIKKKMKHLG  120
 121 LDPATHKPMNDITHQTDPNQDKKPNMCSTINEGEEIKDQTPKDDVITETTKTLMLSDNDE  180
 181 ELVAKNCKILCAEEVDLESLFETQCNEISSSSFSSLCSNISRSESSSYLAEDSISLEQWD  240
 241 LDMTDPFVPWDLFANLDDNLFLL
Interface Residues: 14, 49, 50, 51, 52, 54, 55, 59, 60, 101, 102, 105, 106, 109, 110, 111
3D-footprint Homologues: 3osg_A, 2kdz_A, 7xur_A, 3zqc_A, 1mse_C, 6kks_A, 7c4r_A
Binding Motifs: M0569 yyyACCwAmywty
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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