Transcription Factor
| Accessions: | DUO1 (EEADannot 2023-12-22) |
| Names: | A0A178VEK7, At3g60460, MYB125 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | EEADannot 2023-12-22 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:MYB |
| Length: | 300 |
| Pfam Domains: | 13-58 Myb-like DNA-binding domain 16-66 Myb-like DNA-binding domain 69-108 Myb-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MRKMEAKKEEIKKGPWKAEEDEVLINHVKRYGPRDWSSIRSKGLLQRTGKSCRLRWVNKL 60 61 RPNLKNGCKFSADEERTVIELQSEFGNKWARIATYLPGRTDNDVKNFWSSRQKRLARILH 120 121 NSSDASSSSFNPKSSSSHRLKGKNVKPIRQSSQGFGLVEEEVTVSSSCSQMVPYSSDQVG 180 181 DEVLRLPDLGVKLEHQPFAFGTDLVLAEYSDSQNDANQQAISPFSPESRELLARLDDPFY 240 241 YDILGPADSSEPLFALPQPFFEPSPVPRRCRHVSKDEEADVFLDDFPADMFDQVDPIPSP 300 |
| Interface Residues: | 13, 48, 49, 50, 51, 53, 54, 58, 59, 101, 102, 105, 106, 109, 110, 111 |
| 3D-footprint Homologues: | 1w0t_A, 3osg_A, 1vfc_A, 2kdz_A, 7xur_A, 3zqc_A, 6kks_A, 7c4r_A, 1mse_C |
| Binding Motifs: | EEAD0056 rrCGGTTA |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.