Transcription Factor

						

			
Accessions: T116478_1.02 (CISBP 1.02)

			
Names: PK14402.1, T116478_1.02;
Organisms: Cannabis sativa
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Myb/SANT
Length: 416
Pfam Domains:   282-333 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 ERVTEIKIMELSLNNNSGLAFVPKTISEFLEHVSKIRDGSEKLSKLDDYVKRFEEEKRKI   60
  61 DAFKRELPLCMSLVTDAIERLKEEEKAIKAMDEFTSFKGNSDENGSTNLVDDSCDKKSWM  120
 121 SSAQLWSTNVVDCDSHNKQTSVSELKPRIEEVAVDRHVSEKQPIGVSDYRNRGGAFVPFK  180
 181 AQPSPPSGVIVRTSLKEDKEVSLSRVPSLSLMPPTPLPTTSPISEMGGTSGDSNPKSSHS  240
 241 CKTGSASSFLTEQVKLVSKSQLVQHQTQHQHHQQQQPFRKQRRCWSIELHRRFVDAIHQL  300
 301 GGSHVATPKQIRELMRVEGLTNDEVKSHLQKYRLHVRKLPNSSTEPDSGLWMSQDQCGDS  360
 361 SHQSASPQGPLAPSGSNKALSHTGGNSTEVEDEEEDEKSDGHSWRGGNHNKAGEDV
Interface Residues: 282, 322, 323, 326, 327, 330, 331
3D-footprint Homologues: 6qec_A, 7d3t_D, 6j5b_C
Binding Motifs: M1308_1.02 rtaGATTCcgy
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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