Transcription Factor
| Accessions: | T161728_1.02 (CISBP 1.02) |
| Names: | NCU00155, T161728_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Zinc cluster |
| Length: | 1090 |
| Pfam Domains: | 120-156 Fungal Zn(2)-Cys(6) binuclear cluster domain 333-590 Fungal specific transcription factor domain |
| Sequence: (in bold interface residues) | 1 MVDQRNTISSDASTSSGAVTEAARARQTRPASQPSNPSGNSTSTNGVSLSAGGSRNSPEM 60 61 YEDDSLELSQHDHASPSESVKSSAHGPLKSESEDTPGDATGHASSEPPTLPVQKRRRVTR 120 121 ACDECRRKKIKCDGKQPCSHCSIYSYDCTYDKPSNRRRNPAPQYIEALESRLQRAESLLR 180 181 KFVPDIDLADPNLDPAIQQEFRAREQARARAAKLKGEAAPKEPEAQDAQIMSMIDAIGQL 240 241 DMKEDGECDFRGISSGAVFFGRMKEHFKGLLSNEHSIPFLFRKAEKTGLFSLNSPQTTAG 300 301 SPWEASSVPNVYELPPLTTVQTLCYYAFSCATCLLRVVHKPTFYESLDRLYEKPQDSWGI 360 361 EEHRFLGLLYAVMALGTMYNIDENPGNPTTHQAAMEEGIKYYTSARLLLQDIAECRDMTS 420 421 LQGLVFMILFLQASSNMSACYAFLGIALRSCIRMGLHRHLRHARLTPIEEQTRRRVFHVV 480 481 RQIDIYVSAILGFPVLLHADDIDQPLPTEVDDKYITKDAILTPDPDERPSFLQAFNAHHR 540 541 LMGILARLIKFIYPVKGVEDCALKSDNEMATYTISYARIKEIERQLHEWFDQLPRYWRPG 600 601 PDDDDIEVIRVRTLLRFAYGHVQMMLYRPFLHYVSARMTAGKRIDDRYYNCAAAGISVSR 660 661 NIVHIGLEIQKQAHLIGPYWFLLYTQFFAILSLVYYVLENPDKTGSAEILADAKAGRDVI 720 721 ANLTQRSLAADRVTTALNTLFDQLPEQLKNGTHRPAPTKKRSYAPGSKAGSNSISSHAQT 780 781 ILHDTLPQRRSDEIVRPQSGPVRRETHHRHPQRTTSFDTVALHQPGMPGHHFATQVTAFQ 840 841 DLLPLDMSSMTGSDTSSNPGAPPVMHRQQHHRQQSGFQQAQTPTTGALYKLDAMMFPSGD 900 901 PFAYPTPLLDQTGGGGHHAVSGQPPPPISAGSVGPTPGAAGPDNMQLYMSGFYDDGSIEG 960 961 QVLGPVAPYLMQHGGPEPPHAGVLDPAAQMSYTTMLNLQLQHQQRQQQQQQQQQHGQDGR 1020 1021 PGSGPGRGQQQQQHPSMHQRHANQSHQHQHPGLHHQQRHQQSDMMEGIFRGEWEDILGGG 1080 1081 GAPPGAGGYR |
| Interface Residues: | 115, 116, 117, 126, 128, 129, 130, 131, 143, 144, 152, 156, 158, 159 |
| 3D-footprint Homologues: | 1f5e_P, 6o19_A, 2er8_C, 1hwt_C, 1pyi_A, 2h8r_B, 7uik_T, 3coq_A, 1d66_B, 1zme_D, 6gys_C |
| Binding Motifs: | M1715_1.02 kkwkCCGrk |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.