Transcription Factor
| Accessions: | 6es3_K (3D-footprint 20231221) |
| Names: | Caudal-type homeobox protein 2, CDX-3, CDX2_HUMAN, Homeobox protein CDX-2 |
| Organisms: | Homo sapiens |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Length: | 72 |
| Pfam Domains: | 5-60 Homeobox domain |
| Sequence: (in bold interface residues) | 1 RTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELAATLGLSERQVKIWFQNRRAKERK 60 61 INKKKLQQQQQQ |
| Interface Residues: | 4, 5, 6, 7, 45, 46, 48, 49, 52, 53, 56, 57, 58, 59, 60 |
| 3D-footprint Homologues: | 3d1n_M, 1puf_A, 1jgg_B, 3lnq_A, 1nk2_P, 6es3_K, 2ld5_A, 7q3o_C, 3rkq_B, 2r5y_A, 4xrs_G, 2hos_A, 1ig7_A, 5zfz_A, 4cyc_A, 2d5v_B, 5flv_I, 5zjt_E, 3a01_E, 2h1k_B, 7psx_B, 2lkx_A, 6a8r_A, 3cmy_A, 2hdd_A, 1fjl_B, 5jlw_D, 1le8_A, 7xrc_C, 2xsd_C, 1e3o_C, 1au7_A, 1zq3_P, 1b72_A, 1o4x_A, 1le8_B, 1du0_A, 3l1p_A, 8g87_X, 4qtr_D, 1mnm_C, 5hod_A, 1puf_B, 1k61_B, 4xrm_B, 6m3d_C |
| Binding Motifs: | 6es3_K rTnGTAAw |
| Binding Sites: | 6es3_A 6es3_F |
| Publications: | Morgunova E, Yin Y, Das PK, Jolma A, Zhu F, Popov A, Xu Y, Nilsson L, Taipale J. Two distinct DNA sequences recognized by transcription factors represent enthalpy and entropy optima. Elife : (2018). [Pubmed] |
| Related annotations: | PaperBLAST |
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