Transcription Factor
| Accessions: | Q96C28 (JASPAR 2024) |
| Names: | ZN707_HUMAN |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q96C28 |
| Length: | 371 |
| Pfam Domains: | 8-48 KRAB box 191-213 Zinc-finger double domain 204-226 Zinc finger, C2H2 type 204-226 C2H2-type zinc finger 204-226 C2H2-type zinc finger 218-242 Zinc-finger double domain 232-254 C2H2-type zinc finger 247-271 Zinc-finger double domain 260-282 Zinc finger, C2H2 type 260-278 C2H2-type zinc finger 260-282 C2H2-type zinc finger 274-299 Zinc-finger double domain 288-310 C2H2-type zinc finger 288-310 Zinc finger, C2H2 type 288-311 C2H2-type zinc finger 302-325 Zinc-finger double domain 315-326 C2H2-type zinc finger 316-338 Zinc finger, C2H2 type 331-355 Zinc-finger double domain 344-366 C2H2-type zinc finger 344-366 Zinc finger, C2H2 type 344-368 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 MDMAQEPVTFRDVAIYFSREEWACLEPSQRALYRDVMLDNFSSVAALGFCSPRPDLVSRL 60 61 EQWEEPWVEDRERPEFQAVQRGPRPGARKSADPKRPCDHPAWAHKKTHVRRERAREGSSF 120 121 RKGFRLDTDDGQLPRAAPERTDAKPTAFPCQVLTQRCGRRPGRRERRKQRAVELSFICGT 180 181 CGKALSCHSRLLAHQTVHTGTKAFECPECGQTFRWASNLQRHQKNHTREKPFCCEACGQA 240 241 FSLKDRLAQHRKVHTEHRPYSCGDCGKAFKQKSNLLRHQLVHTGERPFYCADCGKAFRTK 300 301 ENLSHHQRVHSGEKPYTCAECGKSFRWPKGFSIHRRLHLTKRFYECGHCGKGFRHLGFFT 360 361 RHQRTHRHGEV |
| Interface Residues: | 164, 168, 187, 189, 190, 193, 214, 215, 216, 217, 218, 220, 221, 232, 242, 243, 244, 245, 246, 248, 249, 251, 252, 253, 255, 270, 271, 272, 273, 274, 276, 277, 298, 299, 300, 301, 302, 303, 304, 305, 306, 327, 328, 329, 330, 331, 332, 333, 334, 354, 355, 357, 358 |
| 3D-footprint Homologues: | 8ssu_A, 8ssq_A, 1tf6_A, 5v3j_F, 7w1m_H, 8cuc_F, 7y3l_A, 7n5w_A, 6u9q_A, 5yel_A, 5yj3_D, 5k5i_A, 1llm_D, 6ml4_A, 2drp_D, 5k5l_F, 8h9h_G, 2kmk_A, 5kkq_D, 2wbs_A, 5ei9_F, 6e94_A, 7ysf_A, 2lt7_A, 6a57_A, 2jpa_A, 1ubd_C, 1tf3_A, 6jnm_A, 4x9j_A, 2gli_A, 1f2i_J, 8gn3_A, 1g2f_F, 5kl3_A, 7txc_E, 6blw_A, 7y3m_I, 3uk3_C, 4m9v_C |
| Binding Motifs: | MA1715.1 / UN0214.1 CCCCACTYCTGGTAC |
| Binding Sites: | MA1715.1.1 / UN0214.1.1 MA1715.1.10 / UN0214.1.10 MA1715.1.11 / UN0214.1.11 MA1715.1.12 / UN0214.1.12 UN0214.1.13 / UN0214.1.14 / UN0214.1.15 MA1715.1.13 / UN0214.1.16 UN0214.1.17 MA1715.1.14 / UN0214.1.18 MA1715.1.15 / MA1715.1.6 / UN0214.1.19 / UN0214.1.7 UN0214.1.2 UN0214.1.20 MA1715.1.2 / UN0214.1.3 MA1715.1.3 / UN0214.1.4 MA1715.1.4 / UN0214.1.5 UN0214.1.6 MA1715.1.8 / UN0214.1.8 MA1715.1.9 / UN0214.1.9 MA1715.1.16 MA1715.1.17 MA1715.1.18 MA1715.1.19 MA1715.1.20 MA1715.1.5 MA1715.1.7 |
| Publications: | ENCODE Project Consortium. An integrated encyclopedia of DNA elements in the human genome. Nature 489:57-74 (2012). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.