Transcription Factor

						

			
Accessions: AtMYB22 (AthaMYB 1.0)

			
Names: At5g40430, AtMYB22, Putative transcription factor, Putative transcription factor MYB22
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9SPH0
Length: 432
Pfam Domains:   229-273 Myb-like DNA-binding domain
  232-291 Myb-like DNA-binding domain
  281-324 Myb-like DNA-binding domain
  283-331 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MEFSLISDENFILNDAHRCPVNDDASHIPKNNLNFFNDNLGQSSRTGWSFSPDLTDISNQ   60
  61 HHQNLIPLIPNYDSQNQNLDTNQNHLVYNSSSYEIPSNYPFMSIKSYSNIDTLEQSMNNI  120
 121 VNNGKIHMIDNPPIFANPKGIFENFHDLQEYTIGNEIVHNEELTNKGYEPTLDKVMGEPQ  180
 181 LFDVPVLEGIKNTTNEIMNQLEDDKMKKTYENKKEASTSKYLKKSDITKKRWTESEDIKL  240
 241 KEMVALEPKKWTKVAKHFEGRTPKQCRERWHNHARPNVKKTTWSEEEDQILIEVHKVIGA  300
 301 KWIQISEQLPGRSYNNVKNHWNTTKRRVQNKSGRTVNRVGNNILENYIRSITINNDDESD  360
 361 GEPTNIENYHDDSEDMLYGEMNLSPEAITQTTKPLTDASTISPYIPMPKENYTLEVCESL  420
 421 EDYLELLRWWD*
Interface Residues: 229, 262, 264, 265, 267, 268, 271, 272, 273, 314, 315, 318, 319, 322, 323, 324
3D-footprint Homologues: 3osg_A, 2kdz_A, 6kks_A, 3zqc_A, 1mse_C, 5eyb_B, 7xur_A
Binding Motifs: AtMYB22_I wwmaGTTr
AtMYB22_II GyTwGTTr
Binding Sites: GTTAGTTA
AAAAGTTA
ACAAGTTA
ATTAGTTG
GCTTGTTG
GTCAGTTA
TACTGTTG
TGCGGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.