Transcription Factor
| Accessions: | AL2G28980.t1 (EEADannot 2026-03-04) |
| Names: | HB13 |
| Organisms: | Arabidopsis lyrata |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:Homeo domain factors HD-ZIP |
| Length: | 293 |
| Pfam Domains: | 85-138 Homeobox domain 140-184 Homeobox associated leucine zipper |
| Sequence: (in bold interface residues) | 1 MSCNNGMSFFPSNFMIQNSYEDDQPHQSPSLAPLLPSCSLPQDLHGFASFLGKRSPMEGC 60 61 CDLETVNNMNGEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 120 121 LQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNR 180 181 EQTESINLNKETEGSCSNRSDNSSDNLRLDISTAPPSNDSTLTGGQPPPPQTVGRHFFPP 240 241 SPATATTTTTMQFFQNSSSGQIMVKEENSISNMFCAMDDHSGFWPWLDQQQYN |
| Interface Residues: | 84, 85, 86, 87, 88, 124, 125, 127, 128, 131, 132, 134, 135, 136, 138, 139 |
| 3D-footprint Homologues: | 2lkx_A, 3cmy_A, 1nk2_P, 1b72_A, 1puf_B, 8ejp_B, 2ld5_A, 6a8r_A, 3rkq_B, 1au7_A, 5hod_A, 5jlw_D, 8ik5_C, 1ig7_A, 7q3o_C, 8osb_E, 1e3o_C, 1le8_A, 9b8u_A, 7psx_B, 3lnq_A, 2hdd_A, 6es3_K, 4xrs_G, 2r5y_A, 1puf_A, 1du0_A, 5zfz_A, 1jgg_B, 5flv_I, 3a01_E, 5zjt_E, 4cyc_A, 8pmf_A, 6wig_A, 1zq3_P, 1fjl_B, 8eml_B, 4qtr_D, 2hos_A, 6m3d_C |
| Binding Motifs: | EEAD0582 wwTCAATwATT |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.