Transcription Factor
| Accessions: | SHOOTMERISTEMLESS (EEADannot 2026-03-04) |
| Names: | Carub.0002s0262.1.p, CrSTM, R0GG68 |
| Organisms: | Capsella rubella |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:null |
| Length: | 384 |
| Pfam Domains: | 122-163 KNOX1 domain 173-222 KNOX2 domain 264-285 ELK domain 304-343 Homeobox KN domain 310-344 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MESGSNSTSCPMAFAGDNSDGPMCPMMMMMPPIMTSHQHHGHDHQHQQQEHDGYAYQSHH 60 61 QQSSTLFLQSLAPPPQATKNKVASSSSPSSCAPPAYSLMEIHHNDVVAGGINPCSSSSSS 120 121 ASVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVVRLEEACSSAAAAAASMGPTGCLGEDP 180 181 GLDQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRN 240 241 NNGSSEEEVDMSNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQ 300 301 LLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATH 360 361 PHHYFMDNVLGNPFPMDHISSTML |
| Interface Residues: | 287, 288, 289, 290, 292, 295, 298, 329, 330, 331, 332, 334, 335, 338, 339, 341, 342, 343, 346 |
| 3D-footprint Homologues: | 3cmy_A, 8ejp_B, 6fqp_B, 2lkx_A, 1mnm_C, 1puf_B, 1le8_B, 7psx_B, 1k61_B, 8pmf_A, 8ik5_C, 8igr_C, 5jlw_D, 1au7_A, 2xsd_C, 7q3o_C, 8osb_E, 7xrc_C, 1le8_A, 2d5v_B, 1fjl_B, 8bx1_A, 6es3_K, 4xrm_B, 2r5y_A, 5zfz_A, 3lnq_A, 2hdd_A, 1jgg_B, 4xrs_G, 1b72_A, 5zjt_E, 4cyc_A, 8eml_B, 6fqq_E, 5hod_A, 3a01_E, 1du0_A, 6a8r_A, 4qtr_D, 8g87_X, 2hos_A, 6m3d_C |
| Binding Motifs: | EEAD0566 CTGTCA |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.