Transcription Factor
Accessions: | 4uus_B (3D-footprint 20231221) |
Names: | Dpbx, EXD_DROME, Homeobox protein extradenticle, HOMEOTIC PROTEIN EXTRADENTICLE |
Organisms: | Drosophila melanogaster |
Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
Uniprot: | P40427 |
Length: | 69 |
Pfam Domains: | 1-55 Homeobox domain 14-52 Homeobox KN domain |
Sequence: (in bold interface residues) | 1 NFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKNIGKA 60 61 QEEANLYAA |
Interface Residues: | 40, 41, 43, 44, 47, 48, 51, 52, 55 |
3D-footprint Homologues: | 5jlw_D, 2ld5_A, 1ig7_A, 4j19_B, 7q3o_C, 1ic8_B, 1le8_A, 1puf_B, 8g87_X, 6a8r_A, 4xrm_B, 3d1n_M, 2hdd_A, 1le8_B, 6m3d_C, 1du0_A, 4cyc_A, 2r5y_A, 1zq3_P, 1jgg_B, 6es3_K, 4xrs_G, 3l1p_A, 1mnm_C, 7psx_B, 1fjl_B, 5zfz_A, 3a01_E, 2d5v_B, 1k61_B, 6fqp_B, 5flv_I, 3lnq_A, 1puf_A, 5zjt_E, 4qtr_D, 3cmy_A, 2h1k_B, 6fqq_E, 1b72_A, 5hod_A, 3rkq_B, 2lkx_A, 2hos_A |
Binding Motifs: | 4uus_AB cnATATATCA |
Binding Sites: | 4uus_C 4uus_D |
Publications: | Foos N, Maurel-Zaffran C, Maté M.J, Vincentelli R, Hainaut M, Berenger H, Pradel J, Saurin A.J, Ortiz-LombardÃa M, Graba Y. A flexible extension of the Drosophila ultrabithorax homeodomain defines a novel Hox/PBC interaction mode. Structure (London, England : 1993) 23:270-9 (2015). [Pubmed] |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.