Transcription Factor
| Accessions: | T104886_1.02 (CISBP 1.02) |
| Names: | POU2F1, T104886_1.02; |
| Organisms: | Homo sapiens |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain,POU |
| Length: | 561 |
| Pfam Domains: | 189-262 Pou domain - N-terminal to homeobox domain 288-344 Homeobox domain |
| Sequence: (in bold interface residues) | 1 VQAAIPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGAT 60 61 ISASAATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTP 120 121 QGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQSTPK 180 181 RIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEAL 240 241 NLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRV 300 301 ALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKA 360 361 IFPSPTSLVATTPSLVTSSAATTLTVSPVLPLTSAAVTNLSVTGTSDTTSNNTATVISTA 420 421 PPASSAVTSPSLSPSPSASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTA 480 481 AAAALQGAAQLPANASLAAMAAAAGLNPSLMAPSQFAAGGALLSLNPGTLSGALSPALMS 540 541 NSTLATIQGLLHGLENFLTKN |
| Interface Residues: | 214, 230, 231, 232, 233, 235, 236, 242, 246, 287, 288, 289, 290, 291, 292, 329, 330, 332, 333, 336, 337, 340, 341, 344 |
| 3D-footprint Homologues: | 7u0g_M, 3d1n_M, 3l1p_A, 1o4x_A, 1e3o_C, 7xrc_C, 1au7_A, 8g87_X, 2xsd_C, 4j19_B, 3cmy_A, 2h1k_B, 5jlw_D, 1puf_A, 5zjt_E, 4cyc_A, 1puf_B, 1ig7_A, 6a8r_A, 1zq3_P, 1jgg_B, 3lnq_A, 2lkx_A, 6es3_K, 7q3o_C, 2ld5_A, 1nk2_P, 5hod_A, 3rkq_B, 2r5y_A, 7psx_B, 2hdd_A, 1b72_A, 3a01_E, 1le8_A, 4qtr_D, 1k61_B, 1fjl_B, 4xrs_G, 5flv_I, 1du0_A |
| Binding Motifs: | M1231_1.02 TTaAtTAT |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.