Transcription Factor
| Accessions: | MEF2D_HUMAN (HOCOMOCO 10) |
| Names: | MEF2D_HUMAN |
| Organisms: | Homo sapiens |
| Libraries: | HOCOMOCO 10 1 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
| Length: | 521 |
| Pfam Domains: | 10-59 SRF-type transcription factor (DNA-binding and dimerisation domain) 95-154 Holliday junction regulator protein family C-terminal repeat |
| Sequence: (in bold interface residues) | 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYAST 60 61 DMDKVLLKYTEYNEPHESRTNADIIETLRKKGFNGCDSPEPDGEDSLEQSPLLEDKYRRA 120 121 SEELDGLFRRYGSTVPAPNFAMPVTVPVSNQSSLQFSNPSGSLVTPSLVTSSLTDPRLLS 180 181 PQQPALQRNSVSPGLPQRPASAGAMLGGDLNSANGACPSPVGNGYVSARASPGLLPVANG 240 241 NSLNKVIPAKSPPPPTHSTQLGAPSRKPDLRVITSQAGKGLMHHLTEDHLDLNNAQRLGV 300 301 SQSTHSLTTPVVSVATPSLLSQGLPFSSMPTAYNTDYQLTSAELSSLPAFSSPGGLSLGN 360 361 VTAWQQPQQPQQPQQPQPPQQQPPQPQQPQPQQPQQPQQPPQQQSHLVPVSLSNLIPGSP 420 421 LPHVGAALTVTTHPHISIKSEPVSPSRERSPAPPPPAVFPAARPEPGDGLSSPAGGSYET 480 481 GDRDDGRGDFGPTLGLLRPAPEPEAEGSAVKRMRLDTWTLK |
| Interface Residues: | 3, 4, 15, 18, 19, 23, 93 |
| 3D-footprint Homologues: | 1n6j_A, 8q9q_A, 1egw_B, 7xuz_H, 8q9r_F, 1hbx_A, 8q9n_B, 8q9p_B, 1c7u_A, 1mnm_A |
| Binding Motifs: | MEF2D_HUMAN.H10MO.C|M01322 gCTATTTwTAkv |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.