Transcription Factor

						

			
Accessions: AtMYB88 (AthaMYB 1.0)

			
Names: AtMYB88
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: F4IRB4
Length: 177
Pfam Domains:     32-76 Myb-like DNA-binding domain
    33-93 Myb-like DNA-binding domain
   82-125 Myb-like DNA-binding domain
   85-133 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MEETTKQNNMKKKKKILLHSDDSKKKERHIVTWSPEEDDILRKQISLQGTENWAIIASKF   60
  61 NDKSTRQCRRRWYTYLNSDFKRGGWSPEEDTLLCEAQRLFGNRWTEIAKVVSGRTDNAVK  120
 121 NRFTTLCKKRAKHEAMAKENRIACCVNSDNKRLLFPDGISTPLKAESESPLTKKMR*
Interface Residues: 64, 65, 66, 67, 69, 70, 73, 74, 75, 116, 117, 120, 121, 124, 125, 126
3D-footprint Homologues: 2kdz_A, 1vfc_A, 1w0t_A, 3zqc_A, 5eyb_B, 6kks_A, 1mse_C, 3osg_A, 7xur_A
Binding Motifs: AtMYB88_I wamaGTTr
AtMYB88_II rbTdGTTr
Binding Sites: AAAAGTTA
ACAAGTTA
AGTAGTTA
AGTGGTTA
GCTTGTTG
GTCAGTTA
GTTAGTTG
TACTGTTG
TGCGGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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