Transcription Factor
| Accessions: | T073482_1.02 (CISBP 1.02) |
| Names: | CUX1, T073482_1.02; |
| Organisms: | Canis lupus familiaris |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | family:CUT,Homeodomain |
| Length: | 1366 |
| Pfam Domains: | 412-489 CUT domain 798-872 CUT domain 983-1061 CUT domain 1107-1163 Homeobox domain 1127-1160 Homeobox KN domain |
| Sequence: (in bold interface residues) | 1 SAEVTIKALKEKIREYEQTLKNQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEA 60 61 EHKVQSLQTALEKTRTELFDLKTKYDEEITAKADEIEMIMTDLERANQRAEVAQREAETL 120 121 REQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASL 180 181 TKLRENSASQISQLEQQLSAKNSTLKQLEEKLKGQADYEEVKKELNILKSMEFAPSEGTG 240 241 TQDASKPLEVLLLEKNRSLQSENAALRISNSDLSGSARRKGKDQPESRRPGPLPASPPQL 300 301 SRNTGEQASNTNGTHQFSPAGLTQDFFSSSLASPSLPLASTGKFALNSLLQRQLMQSFYS 360 361 KAMQEAGSTSMIFSTGPYSTNSISSQSPLQQSPDVNGMAPSPSQSESAGSVSEGEEIDTA 420 421 EIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFL 480 481 SDEQNILALRSIQGRQRENPGQSLNRLFQEVPKRRNGSEGNITTRIRASETGSDEAIKSI 540 541 LEQAKRELQVQKTAEPAQPSSTSSSGSSDDAIRSILQQARREMEAQQAALDPALKPAPLS 600 601 QADLAILSPKLIPSSPMSSVSSYPPLALSLKKPPTAPDTSASTLPNPPALKKESQDAPGL 660 661 DLPGAAESAQGVLRHVKSELGRSGVWKDHWWSTVQPERKSAAPPEDAKSEEAGGTKEKGG 720 721 GSQPRADRSQLQGPSSSSEYWKEWPSAESPYSQSSELSLTGASRSETPQNSPLPSSPIVP 780 781 MSKPAKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSV 840 841 SDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPVQGQQQGPVLHSVTSLQDPLQQ 900 901 GCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPPIETSKDGKPPEPSDPPAS 960 961 DSQPATPLPLSGHSALSIQELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQ 1020 1021 GSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVS 1080 1081 DSQPCEPPSVGIDYSQGASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELA 1140 1141 TQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGSQGQAGASDSPSARSSRAAPSSEGDSC 1200 1201 DGVEAAEGPGAADAEESGGPAAAEREEAPRPAEKAQPPPSGAPAPAPEDAEEEGRPRAPX 1260 1261 PRRPSGADAVAKAGGGGGRYFSAPPAEGPCRARDGAHRSSALPSTSAPAAARRPSSLQSL 1320 1321 FGLPEAAGARDSRDNPLRKKKAANLNSIIHRLEKAASREEPIEWEF |
| Interface Residues: | 448, 449, 451, 453, 454, 1019, 1020, 1022, 1024, 1025, 1083, 1099, 1100, 1101, 1102, 1107, 1108, 1109, 1110, 1151, 1152, 1155, 1156, 1159, 1160, 1163, 1187, 1190 |
| 3D-footprint Homologues: | 2o4a_A, 2d5v_B, 8bx1_A, 8ejp_B, 1fjl_B, 8pmf_A, 1ig7_A, 5zfz_A, 3cmy_A, 6a8r_A, 3d1n_M, 2lkx_A, 6m3d_C, 1nk2_P, 6es3_K, 7q3o_C, 3lnq_A, 2hdd_A, 5hod_A, 1au7_A, 2hos_A, 8osb_E, 4xrs_G, 2xsd_C, 7xrc_C, 1e3o_C, 1o4x_A, 8eml_B, 6fqp_B, 4qtr_D, 9b8u_A, 1puf_B, 1du0_A, 8g87_X, 6fqq_E, 4xrm_B, 1jgg_B |
| Binding Motifs: | M3064_1.02 wwtATYGATTAtykw |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.