Transcription Factor
| Accessions: | T001926_1.02 (CISBP 1.02) |
| Names: | PF11_0442, T001926_1.02; |
| Organisms: | Plasmodium falciparum |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:AP2 |
| Length: | 1604 |
| Pfam Domains: | 1365-1413 AP2 domain |
| Sequence: (in bold interface residues) | 1 MSNPFNSSDYIKGDNEHKSGYEEMKEYTNVNKNINLNECTKDHINIKDNDGIIKNDSKEC 60 61 KDSHHESQDMCNVSNKYNISANHMENIKEQNDTHQMNETLLHNKMYNEEENNILSNITEY 120 121 RKNDQHEQKINDSDDVLIKESRNNYHNNNENIQMNNINDEVIRDVLDVSNSEHDKMNVCD 180 181 EGKKNEVLSYISMNNENSEKEIKMDMSINCNNAKGTNKTNKTNETNGIDNNNDDNNDNNN 240 241 DDNNDNINNIYSNSSCYELKYTMEEDNEIKNNSNYVKESDKNVVDTKIDNINFVNKQSEM 300 301 CNESDVNNNNINDIRNNSNVLDVVNNNVSSNSRMLPNVDISSNDEEKQNCDNLNNYIIND 360 361 TIDNKQEPYNNNESSIMINTDNYSNNNSILNNENVYDTIDDEPKQICSDSDTYTYNNMNN 420 421 NDVENITNDVEMYKNDFTMINEHIVQNANYDNDKGDQLNIQDDNLCIQNEPTSFSQDNEN 480 481 VNASNKVIISSEMEQNVMNDELKNDHVINKETNEHQDENNMISHQNESEQHEICNDINEH 540 541 NNNNNKSIRNQNDENDFMNKNINTTENEQIKQERTINKSNDINDTCTINKIEEHIEQKGS 600 601 KDTVIYDVVNNERDTNNNNMKNGENEKNEKNEKNEKNEKNEKNEKNEKNEKNEKNMKNMK 660 661 NMKNIKNDMENIVKKISQDTVIVDVNDELLDPNINNDFIKKKVSEDTIVSAIQSERKEGK 720 721 KNKRATHKINEQKVLTPTKYFVNDMSYVGSVGKTRQSSKMVQMDPMMQMDLRIQMDPRMQ 780 781 MDPRMQMDPKVQMDSMNQMDPMNQSNQINQINQISQINQISQINQISQINQINQINQINQ 840 841 INQSNQMNHINYINQSNHINNIYHIPSSNPVEDEYKSNLMNNLNSDNMNSYLTMNDLNGD 900 901 MDCKYAQSGRKDYMRNSGKVEEQIMNMNNEKYLQWFDTIYTVCVKLDDLCCRLSGTFPHS 960 961 MNIWEREGKINMNTLKSAFYKYEDMKLNLNNNDEGNNKSVMMSPNYTASNNVDSSIDDPY 1020 1021 MKSNYMSPSIINKNDDIKIKRMKKYNMNHMDDSNISMYTKNAINKQINLTNNNRKNYRSN 1080 1081 DPYINIENYTPMDNNISQMEDYLQIDNYTPNIIDPNVCNNFINCNKNNKINQNKNNKIMN 1140 1141 TNSVHDYVIPNDLYNVENINVMGNNTTHNEKGKRTRRKSSDKNMKAPKLTKEEEEEMELL 1200 1201 KLYNNNNNNNENNISNIASIQNNITNNLITNGKYSNDLFFHQNGFNNCSLYNEENKMNCS 1260 1261 EHLNIVPINHNNNNIMCSNNHINMLAMNNNVINYKEENTSTTKKGKKGNRKINATKNIEK 1320 1321 KTPKKNSTVNRSNNKVIKNESEFEYLLELSDKEGPNLDNPEDLKCDVAGVYWDKRSWIAS 1380 1381 WYDNGKRYYKSFSAKTHGFYKSKFWAIKVRLSKVKGQTIFGKNSRKNKNNKTDADNTNGN 1440 1441 NNNVNNTNAGNIITLNNLNNVNNLNNVNNLNNVNNLNNVNNLNNVNNLNNVNNLNNVNNL 1500 1501 NNINNNTNISSTNMTGSSLNSPLLNGVHMNNIHMNSINRNNINMNNINMNNINMNNINMN 1560 1561 NINMNNVNDMNNVNINNPNIINDNHMPYHNPIMPVNNNIPLNNL |
| Interface Residues: | 860, 901, 902, 904, 906 |
| 3D-footprint Homologues: | 5hr4_C |
| Binding Motifs: | M0052_1.02 AGCTAGCT |
| Related annotations: | PaperBLAST |
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