Transcription Factor

Accessions: TFAP2A_DBD (HumanTF 1.0)
Names: Activating enhancer-binding protein 2-alpha, Activator protein 2, AP-2 transcription factor, AP2-alpha, AP2A_HUMAN, TFAP2A, Transcription factor AP-2-alpha
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Uniprot: P05549
Notes: Ensembl ID: ENSG00000137203; DNA-binding domain sequence; TF family: AP2; Clone source: Gene synthesis
Length: 225
Pfam Domains: 3-209 Transcription factor AP-2
Sequence:
(in bold interface residues)
1 VNPNEVFCSVPGRLSLLSSTSKYKVTVAEVQRRLSPPECLNASLLGGVLRRAKSKNGGRS 60
61 LREKLDKIGLNLPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAVAEFLNRQ 120
121 HSDPNEQVTRKNMLLATKQICKEFTDLLAQDRSPLGNSRPNPILEPGIQSCLTHFNLISH 180
181 GFGSPAVCAAVTALQNYLTEALKAMDKMYLSNNPNSHTDNNAKSS
Interface Residues: 18, 52, 53
3D-footprint Homologues: 8j0k_B
Binding Motifs: TFAP2A_DBD_1 ysCCCyvrGGCa
TFAP2A_DBD_2 hGCCysAGGCw
TFAP2A_DBD_3 wsCCcybrgGGSa
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Related annotations: PaperBLAST

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