Transcription Factor
| Accessions: | T082012_1.02 (CISBP 1.02) |
| Names: | Foxd1, T082012_1.02; |
| Organisms: | Mus musculus |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | family:Forkhead |
| Length: | 456 |
| Pfam Domains: | 130-225 Fork head domain |
| Sequence: (in bold interface residues) | 1 MTLSTEMSDASGLAEETDIDVVGEGEDDEEEEDDDDEGGGGRGGGGSRLPSSAQRRRRSY 60 61 AGEDDLEDLEEEDDDDLLLASRPAASPAPPGPAPAPGTGSGGCSGAGAGGGAGGGTGAGT 120 121 GGGAKNPLVKPPYSYIALITMAILQSPKKRLTLSEICEFISSRFPYYREKFPAWQNSIRH 180 181 NLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLLAPHAAAEA 240 241 LLLRGAGPAAGAGDPGAALFPPPPPPPACGYGAYGCAYGLQLPPCAPPSALFAAAAAAAA 300 301 AAFHPHSPPPPPPPPPPPPGAAAELARTAFGYRSHALAAALPGPLQAAAVKAGGPGAAAL 360 361 ARSPFSIESLIGRTRGPAAAGAHVSSGAASGTAPGPGGGGCAVQAAAGPAVALTRSLVVA 420 421 AAAAASSVSSSAALGTLHQGTALSSVENFTARISNC |
| Interface Residues: | 173, 175, 176, 177, 179, 180, 181, 183, 184, 193, 200, 222, 225 |
| 3D-footprint Homologues: | 7vox_H, 2hdc_A, 7yzg_A, 7tdw_A, 3g73_A, 7yz7_A, 6el8_A, 7tdx_A, 3l2c_A, 7yzb_A, 6nce_A, 2uzk_A, 7vou_C, 2a07_J, 7yze_A, 7cby_C, 3co6_C, 6ako_C, 2c6y_A, 3qrf_G |
| Binding Motifs: | M3296_1.02 SywRwGTAAACAwwgs |
| Related annotations: | PaperBLAST |
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