Transcription Factor

						

			
Accessions: T161788_1.02 (CISBP 1.02)

			
Names: NCU06707, T161788_1.02;
Organisms: Neurospora crassa
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Zinc cluster
Length: 711
Pfam Domains:   303-334 Fungal Zn(2)-Cys(6) binuclear cluster domain
  488-614 Transcriptional enhancer, Asx-hm domain
Sequence: 
(in bold interface residues)		   1 MAEEGSSSPLSSVLSSPPASPPRSVSGDWDAILVQKIDTAAQVTLEEIAAEKSTVEEPAV   60
  61 EEPAVEEPAVEEPAVEEPAVEEPAVEEPAVEVPAVEEPAVEEPAIEEQTVEEPTVEEPTV  120
 121 EEPTVEEPTVEEPTVEEPTVEEPATKKTATKRSATKRSAAKRSATKRSAAKKPAAKKPAV  180
 181 EQGYVKEPEVQGPEEPEGEPATPLAAPSACPENKTEFRPSDQLEAQQPEEKGSTSWAAIN  240
 241 LPPPKLRSVNKPEVPTREEEPIAPSAAPSSVPKKRKSLPEAVSSKEGVADSRNILKPKLT  300
 301 RGACTPCRENKLKCLKEKPICSRCSGSGTHCVYAFEQPRKGVSAAARSVSFKAEAVPADV  360
 361 GEPKALSPQDAHADSAVQDLEVEKEIATPAIKAATVADSSINGQGFKGPKNEDPSTVTKR  420
 421 ARKRASGQTPEEAVLKTDAWSSKATRHSGSSDEQLGTELGKRKASDQDKSSTTKRPRHAG  480
 481 DAPKKTNLDRKWEAPFVYTDEKSPLTNADLRAILLLPRAWDVLTPDERKDILAKFPDDSH  540
 541 ILDPGTEIARPDLVSLRNNDHFRYDCARYLENIERGRHDEQWLQEAWVAHEKHKRGDYDD  600
 601 FLIKEFENDWATKIPAELLQKTSRKNETLAADAVAVSENKAIAKEQHKALPGRIKSASVI  660
 661 QEVPPADTASVVMAETNTNHIADYHPNGLEESNTNGARYTELRFEVPHEVD
Interface Residues: 310, 311, 312, 339, 465, 467, 468, 469, 471, 472, 478
3D-footprint Homologues: 1pyi_A, 2hap_D, 7uik_T, 3coq_A, 1d66_B, 6fk5_A, 4jcy_A
Binding Motifs: M1751_1.02 yrCayss
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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