Transcription Factor
| Accessions: | T107426_1.02 (CISBP 1.02) |
| Names: | T107426_1.02;, TVAG_406980 |
| Organisms: | Trichomonas vaginalis |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:IBD |
| Length: | 242 |
| Pfam Domains: | 18-143 Transcription-initiator DNA-binding domain IBD |
| Sequence: (in bold interface residues) | 1 MPAEEPDPRPSYWERLSEQDKQTYMILRTTFSSANCKNRRNKSAETFKEIIDSLKAFVMR 60 61 GDSEDRNRALVCGIYWLKDSIAINTRQLIKILSKCKSSINGSFQQLGYGTIPAGVDSCGE 120 121 LIKVFPEWNNNFSELRQWTVRQLMSSAPKPSSIAEFLQKTLQNQNQTQQFFTPPPNQLEM 180 181 MNLPGVSIGMNNQFTSAPPAPIIEQPAQDFNNFHEQPLSPQPEIDSYAFENDDISNFMWA 240 241 AF |
| Interface Residues: | 29, 32, 33, 36, 37, 87, 89, 90, 93, 149, 189, 190, 192, 193 |
| 3D-footprint Homologues: | 2wt7_A, 5b7j_A, 8xas_E, 4y5w_B |
| Binding Motifs: | M1259_1.02 yGrCCAaaya |
| Related annotations: | PaperBLAST |
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