Transcription Factor

Accessions: T107679_1.02 (CISBP 1.02)
Names: Irf6, T107679_1.02;
Organisms: Mus musculus
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:IRF
Length: 87
Pfam Domains: 7-49 Interferon regulatory factor transcription factor
Sequence:
(in bold interface residues)
1 MALHPRRVRLKPWLVAQVDSGLYPGLIWLHRDSKRFQIPWKHATRHSPCSLPPACSCHRL 60
61 CLPSDPDCCACPLLSSLIFILYIRIFF
Interface Residues: 35, 42, 44
3D-footprint Homologues: 5n8r_B, 2pi0_B, 1if1_B, 2o61_A
Binding Motifs: M1266_1.02 rrccGAwAcy
Related annotations: PaperBLAST

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