Transcription Factor
| Accessions: | Q9VQD6 (JASPAR 2024) |
| Names: | ELBA2_DROME |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q9VQD6 |
| Length: | 381 |
| Pfam Domains: | 289-365 BEN domain |
| Sequence: (in bold interface residues) | 1 MAGGFRPYDQDSCPNLTNSEAPEFSMSVVCKTEPHYFHPQTAILPSVQYSHPYHHYLSQF 60 61 APNFVPYYYRLLSRPIMKQEEMDIENYINYEVAAQQTMMRQRTLKPLGQLQIQMPPPIIV 120 121 NQPVKPVPVKAVPVRRSSPPKRRVINAQLVAVATASGGIKNIEPRVEPLPRLEESFKQQV 180 181 AKIQKSQHHYEQLFGRLTSMLKTLNQRYDNDAEDVPAPPSKRPRHMSTSSSESHIPDTAS 240 241 EKDEKDTLVQYPHRVQKEDGSAVYVLGPNGTQITAHQYGEVFWTNAPVATRCLLCVVFSS 300 301 DELATHTLTGKPSPAFYGRERPPKLQLDQRKVDDIVVCVRNRTGGKERVIRATITTKCAD 360 361 TAKKYKRRAKKAQKVAIKEEY |
| Interface Residues: | 291, 313, 314, 315, 316, 355, 356, 359, 360, 363, 364 |
| 3D-footprint Homologues: | 4ix7_B, 4x0g_B, 7yul_A |
| Binding Motifs: | MA1838.1 whCAATTAGww MA1838.2 CAATTAG |
| Binding Sites: | MA1838.1.11 / MA1838.1.9 MA1838.1.18 MA1838.1.11 / MA1838.1.14 MA1838.1.13 MA1838.1.1 / MA1838.1.2 MA1838.1.10 / MA1838.1.12 MA1838.1.12 / MA1838.1.17 MA1838.1.14 MA1838.1.15 / MA1838.1.18 MA1838.1.16 MA1838.1.17 / MA1838.1.19 MA1838.1.19 MA1838.1.2 / MA1838.1.4 MA1838.1.20 MA1838.1.3 MA1838.1.4 / MA1838.1.5 MA1838.1.5 / MA1838.1.6 MA1838.1.6 / MA1838.1.7 MA1838.1.7 / MA1838.1.8 MA1838.1.8 / MA1838.1.9 MA1838.2.19 / MA1838.2.2 / MA1838.2.9 MA1838.2.17 MA1838.2.12 / MA1838.2.8 MA1838.1.10 MA1838.1.13 MA1838.2.10 / MA1838.2.11 MA1838.2.18 MA1838.2.13 / MA1838.2.16 MA1838.1.1 MA1838.1.15 MA1838.1.16 MA1838.1.20 MA1838.1.3 MA1838.2.1 / MA1838.2.5 / MA1838.2.6 MA1838.2.14 MA1838.2.15 MA1838.2.20 MA1838.2.3 MA1838.2.4 MA1838.2.7 |
| Publications: | Aoki T, Sarkeshik A, Yates J, Schedl P. Elba, a novel developmentally regulated chromatin boundary factor is a hetero-tripartite DNA binding complex. Elife : (2012). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.