DNA Binding Site
| Accessions: | GAGGTCAA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | GAGGTCAA |
| Type: | Heterodimer |
| Binding TFs: | UP00009A (Zinc finger, C4 type (two domains)) UP00048A (Zinc finger, C4 type (two domains)) UP00053A (Zinc finger, C4 type (two domains)) UP00079A (Zinc finger, C4 type (two domains)) UP00606A (Zinc finger, C4 type (two domains)) |
| Binding Motifs: | UP00009A_1 dmtcAAAGGTCAhswg UP00048A_1 kmycAAAGGTCAcstg UP00053A_1 tshykTGACCCCdyrmt UP00079A_1 kmkyCAAGGTCAtrykm UP00009A_2 ckcgysGGGTCAsbyw UP00048A_2 akagysGGGTCAakkm UP00053A_2 kcrcrwAGktyrtwmk UP00079A_2 vkbkAGGGGTCAarssm UP00606A_1 mywgvhhTmGAGGTCAwmbwrsy |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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