DNA Binding Site
| Accessions: | GAGTACTC (UniPROBE 20160601) |
| Organisms: | Mus musculus, Plasmodium falciparum, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | GAGTACTC |
| Type: | Heterodimer |
| Binding TFs: | UP00095A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) UP00119A (Homeobox domain) UP00231A (Homeobox domain) UP00442A (AP2 domain) UP00605A (Homeobox domain) UP00605B (Homeobox domain) |
| Binding Motifs: | UP00095A_1 ydhacAGTGCTCmywrw UP00119A_1 wttwrAGTACTyrAaty UP00231A_1 hwarCCACTTGArawtw UP00095A_2 kacgwGACTCCyywmms UP00442A_1 ydykakkGtGTACaCmwkrwcw UP00605A_1 twwrrrdCCACTyGAvwtysks UP00605B_1 twtrrrkCCACTygAvwtygks |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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