DNA Binding Site

Accessions: 4pu4_Q (3D-footprint 20231221)
Organisms: Shewanella oneidensis, strain MR-1
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 20
Sequence: AAGTGTGATAAGTAACCTAA
Binding TFs: 4pu4_D (Helix-turn-helix, Helix-turn-helix domain, Helix-turn-helix domain)
Binding Motifs: 4pu4_ABCD AGGGTTnnnTnnnT
Publications: Wen Y, Behiels E, Felix J, Elegheert J, Vergauwen B, Devreese B, Savvides S.N. The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence. Nucleic acids research 42:10134-47 (2014). [Pubmed]

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