DNA Binding Site
| Accessions: | 3f27_B (3D-footprint 20231221), 3u2b_B (3D-footprint 20231221) |
| Organisms: | Mus musculus |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Length: | 16 |
| Sequence: | CCAGGACAATAGAGAC |
| Type: | Heterodimer |
| Binding TFs: | 3f27_D (HMG (high mobility group) box, Domain of unknown function (DUF1898)) 3u2b_C (HMG (high mobility group) box, Domain of unknown function (DUF1898)) |
| Binding Motifs: | 3f27_D ACAATa 3u2b_C cTaTTGT |
| Publications: | Palasingam P, Jauch R, Ng C.K, Kolatkar P.R. The structure of Sox17 bound to DNA reveals a conserved bending topology but selective protein interaction platforms. Journal of molecular biology 388:619-30 (2009). [Pubmed] Jauch R, Ng C.K, Narasimhan K, Kolatkar P.R. The crystal structure of the Sox4 HMG domain-DNA complex suggests a mechanism for positional interdependence in DNA recognition. The Biochemical journal 443:39-47 (2012). [Pubmed] |
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