DNA Binding Site

Accessions: 2fio_D (3D-footprint 20231221)
Organisms: Bacillus phage phi29
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 41
Sequence: TAACTTTTTGCAAGACTTTTTTATAAAATGTTGACGTTTTT
Type: Heterodimer
Binding TFs: 2fio_A (Phi-29-like late genes activator (early protein GP4))
2fio_B (Phi-29-like late genes activator (early protein GP4))
Binding Motifs: 2fio_A TGTtg
2fio_AB AaCtnnnnnnnnnnnnnnnnnnnnnnnTGTT
Publications: Badia D, Camacho A, Pérez-Lago L, Escandón C, Salas M, Coll M. The structure of phage phi29 transcription regulator p4-DNA complex reveals an N-hook motif for DNA. Molecular cell 22:73-81 (2006). [Pubmed]

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