DNA Binding Site

Accessions: 2r5z_D (3D-footprint 20231221)
Organisms: Drosophila melanogaster
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Length: 19
Sequence: CAGCCGATTAATCTTAGAG
Binding TFs: 2r5z_B (Homeobox domain, Homeobox KN domain)
Binding Motifs: 2r5z_AB AGATTAATcGG
2r5z_B aGAt
Publications: Joshi R, Passner J.M, Rohs R, Jain R, Sosinsky A, Crickmore M.A, Jacob V, Aggarwal A.K, Honig B, Mann R.S. Functional specificity of a Hox protein mediated by the recognition of minor groove structure. Cell 131:530-43 (2007). [Pubmed]

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