DNA Binding Site

Accessions: CTTCCGGC (UniPROBE 20160601)
Organisms: Mus musculus
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: CTTCCGGC
Type: Heterodimer
Binding TFs: UP00013A / UP00408A (Ets-domain)
UP00015A / UP00403A (Ets-domain)
UP00090A / UP00407A (Ets-domain)
UP00410A (Ets-domain)
UP00411A (Ets-domain)
UP00412A (Ets-domain)
UP00413A (Ets-domain)
UP00414A (Ets-domain)
UP00415A (Ets-domain)
UP00416A (Ets-domain)
UP00417A (Ets-domain)
UP00420A (Ets-domain)
UP00421A (Ets-domain)
UP00423A (Ets-domain)
Binding Motifs: UP00013A_1 mmawACCGGAAGTkhwv
UP00015A_1 mkdwcsCGGAARtwa
UP00090A_1 wwcmmGGAArTwa
UP00403A_1 smyswryTTCCGGsttk
UP00407A_1 vhykwAyTTCCKgsttr
UP00408A_1 mvwtACCGGAAGTrkwr
UP00410A_1 mswtACCGGAAGYdsmr
UP00411A_1 vtsmAyTTCCGGtwkc
UP00412A_1 cdmaACwTCCGGtwyc
UP00413A_1 wbkwACTTCCGGkwty
UP00414A_1 crkkyACCGGAArtaaw
UP00415A_1 vtgwryTTCCGGyarc
UP00416A_1 mbsrAyTTCCGGtwky
UP00417A_1 stsmAywTCCGGtggy
UP00420A_1 ackyACCGGAAGydmms
UP00421A_1 mswbaCCGGAAGTrrma
UP00423A_1 cdmaACWTCCGGtmvc
UP00013A_2 cydtywTccsmcysmh
UP00015A_2 wwrkAkTTCCkAwsww
UP00090A_2 gytcmaaaAAaAamydy
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.