DNA Binding Site
| Accessions: | MA1047.2.3 (JASPAR 2024), MA1047.2.5 (JASPAR 2024), MA1068.2.2 (JASPAR 2024), MA1069.2.3 (JASPAR 2024), MA1070.2.2 (JASPAR 2024) |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 15 |
| Sequence: | AACATGACGTCACTA |
| Type: | Heterodimer |
| Binding TFs: | P43273 (bZIP transcription factor, Basic region leucine zipper, Seed dormancy control) Q93ZE2 (bZIP transcription factor, Basic region leucine zipper, Seed dormancy control) Q39163 (bZIP transcription factor, Basic region leucine zipper, Seed dormancy control) Q39140 (bZIP transcription factor, Basic region leucine zipper, Seed dormancy control) P43273 Q39140 Q39163 Q93ZE2 |
| Binding Motifs: | MA1047.2 wwgaTGACGTCAycw MA1068.2 wwgaTGACGTCAycw MA1069.2 wwgaTGAyGTCAtcw MA1070.2 wwgaTGACGTCAycw |
| Publications: | Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] Despres C., DeLong C., Glaze S., Liu E., Fobert P. R. The Arabidopsis NPR1/NIM1 protein enhances the DNA binding activity of a subgroup of the TGA family of bZIP transcription factors.. Plant Cell 12:279-290 (2000). [Pubmed] Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). [Pubmed] |
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