DNA Binding Site
| Accessions: | MA1227.2.18 (JASPAR 2024), MA1670.1.18 (JASPAR 2024), MA1679.1.2 (JASPAR 2024) |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 15 |
| Sequence: | GAGCACCGACGTTGT |
| Type: | Heterodimer |
| Binding TFs: | Q8LC30 (AP2 domain) Q9SYS6 (AP2 domain) Q38Q39 (AP2 domain) Q38Q39 Q8LC30 Q9SYS6 |
| Binding Motifs: | MA1227.2 hwtyrCCGACAwwww MA1670.1 wwttRCCGACAtaww MA1679.1 cdyCACCGACAhtdh |
| Publications: | Magnani E, Sjölander K, Hake S. From endonucleases to transcription factors: evolution of the AP2 DNA binding domain in plants. Plant Cell 16:2265-77 (2004). [Pubmed] Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] Dong CJ, Liu JY. The Arabidopsis EAR-motif-containing protein RAP2. 1 functions as an active transcriptional repressor to keep stress responses under tight control : (BMC). [Pubmed] |
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