DNA Binding Site
| Accessions: | GGGCGCCA (UniPROBE 20160601), MA2126.1.1 (JASPAR 2024), MA2126.1.11 (JASPAR 2024), MA2126.1.12 (JASPAR 2024), MA2126.1.16 (JASPAR 2024), MA2126.1.18 (JASPAR 2024), MA2126.1.2 (JASPAR 2024), MA2126.1.7 (JASPAR 2024), MA2126.1.8 (JASPAR 2024), MA2126.1.9 (JASPAR 2024) |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | GGGCGCCA |
| Type: | Heterodimer |
| Binding TFs: | UP00001A (E2F/DP family winged-helix DNA-binding domain) UP00003A (E2F/DP family winged-helix DNA-binding domain) E9Q4R5 (Zinc finger, C2H2 type, KRAB box, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) E9Q4R5 |
| Binding Motifs: | UP00001A_1 rwwArgGCGCGCsaw UP00003A_1 rhwArGGCGCGCshw UP00001A_2 hsywyGGCGCCAaavks UP00003A_2 msywyGGCGCCAmrmgs MA2126.1 GGGCGCCA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] Yang B, Fang L, Gao Q, Xu C, Xu J, Chen ZX, Wang Y, Yang P. Species-specific KRAB-ZFPs function as repressors of retroviruses by targeting PBS regions. Proc Natl Acad Sci U S A : (2022). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.