DNA Binding Site
| Accessions: | GATGATAC (UniPROBE 20160601) |
| Organisms: | Mus musculus, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | GATGATAC |
| Type: | Heterodimer |
| Binding TFs: | UP00159A (Homeobox domain, Homeobox KN domain) UP00192A (Homeobox domain, Homeobox KN domain) UP00195A (Homeobox domain, Homeobox KN domain) UP00620A (Homeobox domain, Homeobox KN domain) UP00620B (Homeobox domain, Homeobox KN domain) UP00620C (Homeobox domain, Homeobox KN domain) |
| Binding Motifs: | UP00159A_1 rakrGGGTATCAcdwyt UP00192A_1 ratrGGGTATCAykwbt UP00195A_1 rAtrGGGTATCAywwwt UP00620A_1 mwkrakGTATCAwtkayycGrg UP00620A_2 gwrrakrrgRTATCAmwtrtdw UP00620B_1 wtawhakrgrTATCAwwTAmym UP00620C_1 kwvrwwrrgGTATCAmttrtgm |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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