DNA Binding Site
| Accessions: | AATAATCC (UniPROBE 20160601) |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | AATAATCC |
| Type: | Heterodimer |
| Binding TFs: | UP00216A (Homeobox domain) UP00109A (Homeobox domain, Homeobox KN domain) UP00160A (Homeobox domain) UP00229A (Homeobox domain) UP00239A (Homeobox domain) UP00208A (Homeobox domain) |
| Binding Motifs: | UP00109A_1 awAArcGGATTAwhg UP00160A_1 wbrgrGGGATTAAcwmh UP00208A_1 wdrrGGGATTAAwTywm UP00216A_1 ttarGGGGATTAAcwwy UP00229A_1 dgwrgGGATTAAtwtwy UP00239A_1 wkrgGGGGATTAAmwat UP00208A_2 arragGGATTAAwTrwm |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.