DNA Binding Site
| Accessions: | TCTTATCA (UniPROBE 20160601), MA0037.5.13 (JASPAR 2024), MA0037.5.14 (JASPAR 2024), MA0037.5.5 (JASPAR 2024), MA1104.3.3 (JASPAR 2024), MA1104.3.9 (JASPAR 2024), MA1701.2.1 (JASPAR 2024), MA1701.2.11 (JASPAR 2024), MA1701.2.12 (JASPAR 2024), MA1701.2.15 (JASPAR 2024), MA1701.2.17 (JASPAR 2024), MA1701.2.2 (JASPAR 2024), MA1701.2.20 (JASPAR 2024), MA1701.2.4 (JASPAR 2024), MA1701.2.5 (JASPAR 2024), MA1970.2.16 (JASPAR 2024), MA1970.2.2 (JASPAR 2024) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Homo sapiens, Caenorhabditis elegans |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | TCTTATCA |
| Type: | Heterodimer |
| Binding TFs: | UP00347A (GATA zinc finger) P23772 (GATA zinc finger) Q92908 (GATA zinc finger, GATA-type transcription activator, N-terminal ) UP00080A (GATA zinc finger) UP00100A (GATA zinc finger) UP00287A (GATA zinc finger) UP00032A (GATA zinc finger) Q10655 (GATA zinc finger) Q9UHF7 (GATA zinc finger) P23772 Q10655 Q92908 Q9UHF7 |
| Binding Motifs: | UP00032A_1 bkwdwakAGATAAGArwtdarg UP00080A_1 wwwrcTGATAAGrrgat UP00100A_1 wawmkwGATAAGarttr UP00287A_1 yyatytyCTTATCgsrddhh UP00347A_1 twvmrrCYGATAAGrrwkwh UP00032A_2 ytwtrywGATtktATCrrbwhm UP00080A_2 rmcmrAGATATCwgybk UP00100A_2 gsgrCGATATCGsmgyd MA0037.5 tCTTATCT MA1104.3 TCTTATCT MA1701.2 tCTTATCA MA1970.2 TCTTATCT |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] Merika M., Orkin S. H. DNA-binding specificity of GATA family transcription factors. Mol. Cell. Biol. 13:3999-4010 (1993). [Pubmed] Shaw-White J. R., Bruno M. D., Whitsett J. A. GATA-6 activates transcription of thyroid transcription factor-1.. J. Biol. Chem. 274:2658-2664 (1999). [Pubmed] Hawkins MG, McGhee JD. elt-2, a second GATA factor from the nematode Caenorhabditis elegans. J Biol Chem 270:14666-71 (1995). [Pubmed] Serandour AA, Mohammed H, Miremadi A, Mulder KW, Carroll JS. TRPS1 regulates oestrogen receptor binding and histone acetylation at enhancers. Oncogene 37:5281-5291 (2018). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.