DNA Binding Site
| Accessions: | 5od6_C (3D-footprint 20231221), 5od6_D (3D-footprint 20231221), 6fzs_C (3D-footprint 20231221), 6fzs_D (3D-footprint 20231221), 6fzt_C (3D-footprint 20231221), 6fzt_D (3D-footprint 20231221), 6tbz_B (3D-footprint 20231221), 6tbz_C (3D-footprint 20231221), 6zmn_C (3D-footprint 20231221), 6zmn_D (3D-footprint 20231221) |
| Organisms: | Homo sapiens, Gallus gallus |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Length: | 16 |
| Sequence: | TGCAGGCGCGCCTGCA |
| Type: | Heterodimer |
| Binding TFs: | 5od6_A (MH1 domain) 6fzs_B (MH1 domain) 6fzt_A (MH1 domain) 6fzt_B (MH1 domain) 6tbz_A (MH1 domain) 6zmn_B (MH1 domain) |
| Binding Motifs: | 6fzs_B CGCCt 5od6_A CGcC 6fzs_AB aGkCGCGCCt 6fzt_A CgcC 6fzt_AB GGCGCGCC 6tbz_A CgcC 6zmn_B CGCC |
| Publications: | Martin-Malpartida P, Batet M, Kaczmarska Z, Freier R, Gomes T, Aragón E, Zou Y, Wang Q, Xi Q, Ruiz L, Vea A, Márquez JA, Massagué J, Macias MJ. Structural basis for genome wide recognition of 5-bp GC motifs by SMAD transcription factors. Nat Commun 8:2070 (2017). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.