DNA Binding Site
| Accessions: | CACACGTG (UniPROBE 20160601) |
| Organisms: | Mus musculus, Saccharomyces cerevisiae, Caenorhabditis elegans |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CACACGTG |
| Type: | Heterodimer |
| Binding TFs: | UP00332A (Helix-loop-helix DNA-binding domain) UP00367A (Helix-loop-helix DNA-binding domain) UP00383A (Helix-loop-helix DNA-binding domain) UP00050A (Helix-loop-helix DNA-binding domain) UP00060A (Helix-loop-helix DNA-binding domain) UP00548B (Helix-loop-helix DNA-binding domain) UP00548C (Helix-loop-helix DNA-binding domain) |
| Binding Motifs: | UP00050A_1 rrawkrgTCACGTGAsymrywy UP00060A_1 kgmsCACGTGgkcrkk UP00332A_1 gwcymasCACGTGsycskhw UP00367A_1 yrdamCACGTGktymr UP00383A_1 wmawgGCACGTGycwwa UP00050A_2 ygysryTmCACGTGGArrsmrgt UP00060A_2 ktGyCAyGcGaCdk UP00548B_1 sGgamrGrCACGTGtCsyhCysy UP00548C_1 rywgggRACAGCTGtyyksracm |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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