DNA Binding Site

Accessions: TATTTACA (UniPROBE 20160601)
Organisms: Mus musculus, Saccharomyces cerevisiae, Homo sapiens
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: TATTTACA
Type: Heterodimer
Binding TFs: UP00353A (Fork head domain, FHA domain)
UP00025A (Fork head domain)
UP00061A (Fork head domain)
UP00073A (Fork head domain, Forkhead N-terminal region)
UP00312A (Fork head domain, FHA domain)
UP00589A (Fork head domain)
UP00589G (Fork head domain)
Binding Motifs: UP00025A_1 wraAtGTAAACAAavrb
UP00061A_1 wwwatrTAAACAAwsrb
UP00073A_1 wawawGTAAAyAAwvab
UP00312A_1 tdwaawGTAAACAAAgrkrv
UP00353A_1 yrwwwtGTAAACAAarrrgr
UP00025A_2 cwaAymAyAACAhmy
UP00061A_2 awatyawAACAAmamm
UP00073A_2 rrwaaTAACAaasgs
UP00589A_1 wkagkywAwrTAAAyAwagrgrk
UP00589G_1 bmavkdwAtrTAAACAAwsrkdk
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

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