DNA Binding Site
| Accessions: | CGGTATCA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | CGGTATCA |
| Type: | Heterodimer |
| Binding TFs: | UP00159A (Homeobox domain, Homeobox KN domain) UP00195A (Homeobox domain, Homeobox KN domain) UP00620A (Homeobox domain, Homeobox KN domain) UP00620B (Homeobox domain, Homeobox KN domain) UP00620C (Homeobox domain, Homeobox KN domain) |
| Binding Motifs: | UP00159A_1 rakrGGGTATCAcdwyt UP00195A_1 rAtrGGGTATCAywwwt UP00620A_1 mwkrakGTATCAwtkayycGrg UP00620A_2 gwrrakrrgRTATCAmwtrtdw UP00620B_2 rwrrwdrrgRTATCAhtyrtkm UP00620C_2 wrmktwrwGRTAYCwmdyrayk |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.