DNA Binding Site
| Accessions: | TTATTAAA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | TTATTAAA |
| Type: | Heterodimer |
| Binding TFs: | UP00169A (Homeobox domain, Homeobox KN domain) UP00589D (Fork head domain) UP00597A (Homeobox domain) UP00627C (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) UP00627F (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger) |
| Binding Motifs: | UP00169A_1 rrwwwTTAATTAAtwyb UP00589D_1 rwwygyrTwwAaTAwAwrdAwr UP00597A_1 ykrsmthymATWAAawvcmgth UP00627C_1 TwtTwawATAmAwATAAwwThkG UP00627F_1 TwtTwmwATAmAwATAAwwtwkG |
| Publications: | Berger M.F, Badis G, Gehrke A.R, Talukder S, Philippakis A.A, Peña-Castillo L, Alleyne T.M, Mnaimneh S, Botvinnik O.B, Chan E.T, Khalid F, Zhang W, Newburger D, Jaeger S.A, Morris Q.D, Bulyk M.L, Hughes T.R. Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences. Cell 133:1266-76 (2008). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.