DNA Binding Site

						

			
Accessions: ATATTACG (UniPROBE 20160601), MA1212.2.6 (JASPAR 2024)

			
Organisms: Saccharomyces cerevisiae, Arabidopsis thaliana
Libraries: UniPROBE 20160601 1, JASPAR 2024 2
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 8
Sequence: ATATTACG
Type: Heterodimer
Binding TFs: UP00473A (bZIP transcription factor)
Q8LC03 (Homeobox domain, Homeobox associated leucine zipper)
Q8LC03
Binding Motifs: UP00473A_1 / UP00473A_2 gsmmamtATTACGTAAtgsmryc
UP00473A_3 ATTAcTAAT
MA1212.2 yAATAATT
			
Publications: Gordân R, Murphy KF, McCord RP, Zhu C, Vedenko A, Bulyk ML. Curated collection of yeast transcription factor DNA binding specificity data reveals novel structural and gene regulatory insights. Genome Biol : (2011). [Pubmed]


Johannesson H., Wang Y., Engstrom P. DNA-binding and dimerization preferences of Arabidopsis homeodomain-leucine zipper transcription factors in vitro. Plant Mol. Biol. 45:63-73 (2001). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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