DNA Binding Site
| Accessions: | GGTATCAA (UniPROBE 20160601) |
| Organisms: | Mus musculus, Drosophila melanogaster, Homo sapiens |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 8 |
| Sequence: | GGTATCAA |
| Type: | Heterodimer |
| Binding TFs: | UP00008A / UP00388A (Homeobox domain, Homeobox KN domain) UP00159A (Homeobox domain, Homeobox KN domain) UP00192A (Homeobox domain, Homeobox KN domain) UP00195A (Homeobox domain, Homeobox KN domain) UP00199A (Homeobox domain, Homeobox KN domain) UP00509A (Homeobox domain, Homeobox KN domain, Homeodomain leucine-zipper encoding, Homez) UP00620A (Homeobox domain, Homeobox KN domain) UP00620B (Homeobox domain, Homeobox KN domain) UP00620C (Homeobox domain, Homeobox KN domain) |
| Binding Motifs: | UP00008A_1 rwwrGGGTATCAhwtwt UP00159A_1 rakrGGGTATCAcdwyt UP00192A_1 ratrGGGTATCAykwbt UP00195A_1 rAtrGGGTATCAywwwt UP00199A_1 atrmaTGACACCthybr UP00388A_1 datrGGGTATCAhwwwt UP00008A_2 mwbskATATATmcryyt UP00388A_2 rwwrGGGTATCAwtwyt UP00509A_1 ywmarrywTGACACCymbhwrw UP00620A_1 mwkrakGTATCAwtkayycGrg UP00620A_2 gwrrakrrgRTATCAmwtrtdw UP00620B_1 wtawhakrgrTATCAwwTAmym UP00620B_2 rwrrwdrrgRTATCAhtyrtkm UP00620C_1 kwvrwwrrgGTATCAmttrtgm UP00620C_2 wrmktwrwGRTAYCwmdyrayk |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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