DNA Binding Site
| Accessions: | CCTTTGAA (UniPROBE 20160601), MA0768.3.1 (JASPAR 2024), MA0768.3.15 (JASPAR 2024), MA0768.3.8 (JASPAR 2024) |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1, JASPAR 2024 2 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 8 |
| Sequence: | CCTTTGAA |
| Type: | Heterodimer |
| Binding TFs: | P27782 (HMG (high mobility group) box, N-terminal CTNNB1 binding, Domain of unknown function (DUF1898)) UP00054A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00058A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00067A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) UP00083A (HMG (high mobility group) box, Domain of unknown function (DUF1898)) P27782 |
| Binding Motifs: | UP00054A_1 twwasWTCAAAGgrahh UP00058A_1 twwasATCAAAGgrwww UP00067A_1 rrwycCTTTGATstwwm UP00054A_3 / UP00083A_1 ddkycCTTTGATstwta UP00054A_2 cyktaTTAbaaayma UP00054A_4 / UP00083A_2 sdrsWTCAATCrstww UP00058A_2 rgssgaawawaaaww UP00067A_2 swrsATCAATCrctww MA0768.3 CCTTTGAT |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.