DNA Binding Site

Accessions: AACTCCGC (UniPROBE 20160601)
Organisms: Saccharomyces cerevisiae
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: AACTCCGC
Type: Heterodimer
Binding TFs: UP00469A
UP00297A
UP00300A (Fungal Zn(2)-Cys(6) binuclear cluster domain)
UP00476A (Fungal Zn(2)-Cys(6) binuclear cluster domain)
Binding Motifs: UP00297A_1 wkrwwrAASTCCGArmwwbw
UP00300A_1 skgkgwAwyTCCGCCbshkks
UP00469A_1 dwttmyrAAsTCCGrrmhwsrg
UP00476A_1 / UP00476A_2 ghskybaAACTCCGrvyckggs
UP00476A_3 CGGAgTCCG
Publications: *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed]

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