DNA Binding Site

Accessions: TAAATAAA (UniPROBE 20160601)
Organisms: Mus musculus, Saccharomyces cerevisiae
Libraries: UniPROBE 20160601 1
1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed]
Length: 8
Sequence: TAAATAAA
Type: Heterodimer
Binding TFs: UP00353A (Fork head domain, FHA domain)
UP00037A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
UP00061A (Fork head domain)
UP00073A (Fork head domain, Forkhead N-terminal region)
Binding Motifs: UP00037A_1 wayAAwhAAmAAkar
UP00061A_1 wwwatrTAAACAAwsrb
UP00073A_1 wawawGTAAAyAAwvab
UP00353A_1 yrwwwtGTAAACAAarrrgr
UP00037A_2 dyggkTCAATAAytykr
UP00061A_2 awatyawAACAAmamm
UP00073A_2 rrwaaTAACAaasgs
Publications: Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed]

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.